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Berlin 2018 – scientific programme

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BP: Fachverband Biologische Physik

BP 12: Computational Biophysics I

Tuesday, March 13, 2018, 09:30–13:00, H 1058

09:30 BP 12.1 Langevin modeling of targeted molecular dynamics: a novel approach to calculate equilibrium free energies from non-equilibrium simulations — •Steffen Wolf and Gerhard Stock
09:45 BP 12.2 Refolding dynamics of molecular constructs after a force quench — •Ken Schäfer and Gregor Diezemann
10:00 BP 12.3 G-PCCA - a generalized Markov state modeling approach for both equilibrium and non-equilibrium systems — •Bernhard Reuter, Konstantin Fackeldey, Susanna Röblitz, Marcus Weber, and Martin E. Garcia
10:15 BP 12.4 Structural-kinetic relationships determine consistent interpretations of coarse-grained peptide kinetics — •Joseph Rudzinski and Tristan Bereau
10:30 BP 12.5 Invited Talk: Microtubule assembly governed by tubulin allosteric gain in flexibility and lattice induced fit — •Maxim Igaev and Helmut Grubmüller
  11:00 15 min. break
11:15 BP 12.6 Specific RNA-cation interactions: Individual binding site affinities from molecular dynamics simulation — •Sergio Cruz-León and Nadine Schwierz
11:30 BP 12.7 On the nature of cytosine pairing in DNA structuresMiriam Kohagen and •Jens Smiatek
11:45 BP 12.8 Loop formation of polyglutamines in the PRIME20 model — •Arne Böker and Wolfgang Paul
12:00 BP 12.9 Pro32 isomerisation effects on β2-microglobulin: a Metadynamics investigation — •Maria Celeste Maschio, Federico Comitani, Carla Molteni, and Stefano Corni
12:15 BP 12.10 Metadynamics Simulations of the Fibrinogen Protomer — •Timo Schäfer, Lorenz Ripka, Friederike Schmid, and Giovanni Settanni
12:30 BP 12.11 Integration of SAXS Data into Biomolecular Simulations — •Marie Weiel, Ines Reinartz, and Alexander Schug
12:45 BP 12.12 Terminal Electron-Proton Transfer Dynamics coupled to Quinone reduction in Respiratory Complex I — •Ana Patricia Gamiz-Hernandez, Alexander Jussupow, Mikael P. Johansson, and Ville R. I. Kaila
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