DPG Phi
Verhandlungen
Verhandlungen
DPG

Regensburg 2013 – scientific programme

Parts | Days | Selection | Search | Updates | Downloads | Help

BP: Fachverband Biologische Physik

BP 17: Biomaterials and Biopolymers II (joint with CPP)

BP 17.9: Talk

Wednesday, March 13, 2013, 12:00–12:15, H43

Benchmarking the water-peptide interaction — •Sucismita Chutia, Mariana Rossi, and Volker Blum — Fritz-Haber-Institut der MPG, Faradayweg 4-6, 14195 Berlin

The interaction between water molecules and the hydration sites of peptides is critical for any quantitative modeling of solvated peptides. We address this interaction for the successive hydration of two peptides for which accurate experimental reference data exist: Ac-Ala5-LysH+ (non-helical) and Ac-Ala8-LysH+ (helical). In particular, finite-temperature Gibbs reference water binding energies Δ G0 and equilibrium constants are known [1,2]. However, earlier force-field predicted preferred water binding sites do not agree with one another. We present an exhaustive first-principles study (density-functional theory based on the van der Waals corrected PBE functional) that demonstrates [3]: (i) There is a close competition between possible hydration sites (protonated carboxyl group or ammonium group). The preferred first hydration site breaks an intramolecular bond of the ammonium group in the unsolvated molecule. (ii) Calculated Δ G0(T) are in remarkable agreement with experimental data. Lowest-energy H2O H-bond networks are predicted for up to five H2O molecules, and the connection to the solvated state is explored by ab initio molecular dynamics with up to 152 H2O molecules. [1] Liu, Wyttenbach, Bowers, IJMS. 236, 81 (2004) [2] Kohtani, Jarrold, JACS. 126, 8454 (2004) [3] Chutia, Rossi, Blum, JPCB DOI: 10.1021/jp3098268

100% | Mobile Layout | Deutsche Version | Contact/Imprint/Privacy
DPG-Physik > DPG-Verhandlungen > 2013 > Regensburg